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Table 2 Primer sequences used for qPCR

From: Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

Primer

NM

Primer set sequence F 5'-3'

Primer set sequence R 5'-3'

Arg1

NM_007482

CTGACCTATGTGTCATTTGG

CATCTGGGAACTTTCCTTTC

Ccl2

NM_011333.3

CAAGATGATCCCAATGAGTAG

TTGGTGACAAAAACTACAGC

Ccl3

NM_011337

CCATATGGAGCTGACACCCC

GAGCAAAGGCTGCTGGTTTC

Ccl4

NM_013652

GGTATTCCTGACCAAAAGAG

TCCAAGTCACTCATGTACTC

Ccl5

NM_013653

TGCTCCAATCTTGCAGTCGT

GCAAGCAATGACAGGGAAGC

Ccl7

NM_013654

CTCTCTCACTCTCTTTCTCC

TCTGTAGCTCTTGAGATTCC

Cd81

NM_133655

CGTAAACAAAGACCAGATCG

GTCTCATGGAAAGTCTTCAC

Csf-1r

NM_001037859

GCCATATACAGGTACACATTC

GTGCCATTAAGAAGTACTGG

Csf-1

NM_001113529

TAGAAAGGATTCTATGCTGGG

CTCTTTGGTTGAGAGTCTAAG

Cx3cl1

NM_009142

CTTCCATTTGTGTACTCTGC

ACTCCTGGTTTAGCTGATAG

Cxcl10

NM_021274

AAAAAGGTCTAAAAGGGCTC

AATTAGGACTAGCCATCCAC

Cxcl16

NM_023158.6

CCATTCTTTATCAGGTTCCAG

CTTGAGGCAAATGTTTTTGG

Cxcl9

NM_008599

GAGGAACCCTAGTGATAAGG

GTTTGATCTCCGTTCTTCAG

Ifn-α

N/A

TGCAACCCTCCTAGACTCATT

CCAGCAGGGCGTCTTCCT

Ifn-β

N/A

ATGAGTGGTGGTTGCAGGC

TGACCTTTCAAATGCAGTAGA

Ifn-γ

NM_008337.4

GCAAAAGGATGGTGACATGA

TTCGCCTTGCTGTTGCTGA

Il-1β

NM_008361.4

TGCCACCTTTTGACAGTGATG

TGATGTGCTGCTGCGAGATT

Il-10

NM_010548.2

AAGGGTTACTTGGGTTGCCA

AAATCGATGACAGCGCCTCAG

Il-1α

NM_010554.4

CATAACCCATGATCTGGAAG

ATTCATGACAAACTTCTGCC

Il-34

NM_001135100

GTTCTTGCTGTAAACAAAGC

ATACATAGATTGCTCAGGGC

Tgf-β

NM_011577.2

GGATACCAACTATTGCTTCAG

TGTCCAGGCTCCAAATATAG

Tlr3

NM_126166.5

AATAGCATCAAAAGAAGCCG

GATGTACCTTGAATCTTCTGC

Tlr7

NM_001290758

CTTCAAGAAAGATGTCCTTGG

AAATTTGTCTCTTCCGTGTC

Tnfa

NM_013693.3

ATGGCCTCCCTCTCATCAGT

GTTTGCTACGACGTGGGCTA

Wnv

N/A

AAGTTGAGTAGACGGTGCTG

AGACGGTTCTGAGGGCTTAC